{
  "_id": "6a1d4cd01d7bb097a0a43fb9",
  "Package": "BDP2",
  "Type": "Package",
  "Title": "Bayesian Adaptive Designs for Phase II Trials with Binary\nEndpoint",
  "Version": "0.1.3",
  "Date": "2018-07-31",
  "Author": "Annette Kopp-Schneider, Manuel Wiesenfarth, Ulrich Abel",
  "Maintainer": "Manuel Wiesenfarth <m.wiesenfarth@dkfz.de>",
  "Description": "Tools and workflow to choose design parameters in Bayesian\nadaptive single-arm phase II trial designs with binary endpoint\n(response, success) with possible stopping for efficacy and\nfutility at interim analyses. Also contains routines to\ndetermine and visualize operating characteristics. See\nKopp-Schneider et al. (2018) <doi:10.1002/bimj.201700209>.",
  "License": "GPL-2",
  "VignetteBuilder": "knitr",
  "Config/pak/sysreqs": "cmake make libuv1-dev zlib1g-dev",
  "Repository": "https://wiesenfa.r-universe.dev",
  "Date/Publication": "2021-04-07 19:47:32 UTC",
  "RemoteUrl": "https://github.com/wiesenfa/bdp2",
  "RemoteRef": "HEAD",
  "RemoteSha": "f674d39ef8686ab7a7cfe7e2c969ace4e2dbdb76",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-01 09:07:31 UTC",
    "User": "root"
  },
  "MD5sum": "230da0a61e748058e6de75be696e3e41",
  "_user": "wiesenfa",
  "_type": "src",
  "_file": "BDP2_0.1.3.tar.gz",
  "_fileid": "973577f8549cf1a8b6e282100e97a8ec30d4164f82be313388a782d1f90df49e",
  "_filesize": 1148597,
  "_sha256": "973577f8549cf1a8b6e282100e97a8ec30d4164f82be313388a782d1f90df49e",
  "_created": "2026-06-01T09:07:31.000Z",
  "_published": "2026-06-01T09:11:44.611Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 78820434514,
      "time": 137,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7327574113"
    },
    {
      "job": 78820434409,
      "time": 116,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7327566967"
    },
    {
      "job": 78820434358,
      "time": 217,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7327586011"
    },
    {
      "job": 78820434450,
      "time": 167,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7327573110"
    },
    {
      "job": 78819916595,
      "time": 191,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7327529553"
    },
    {
      "job": 78820434540,
      "time": 108,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7327564155"
    },
    {
      "job": 78820434394,
      "time": 86,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7327557266"
    },
    {
      "job": 78820434574,
      "time": 86,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7327557013"
    },
    {
      "job": 78820434550,
      "time": 109,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7327565283"
    }
  ],
  "_buildurl": "https://github.com/r-universe/wiesenfa/actions/runs/26745510036",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/wiesenfa/bdp2",
  "_commit": {
    "id": "f674d39ef8686ab7a7cfe7e2c969ace4e2dbdb76",
    "author": "Manuel Wiesenfarth <m.wiesenfarth@dkfz-heidelberg.de>",
    "committer": "Manuel Wiesenfarth <m.wiesenfarth@dkfz-heidelberg.de>",
    "message": "version 0.1.3\n",
    "time": 1617824852
  },
  "_maintainer": {
    "name": "Manuel Wiesenfarth",
    "email": "m.wiesenfarth@dkfz.de",
    "login": "wiesenfa",
    "description": "",
    "uuid": 22031404
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "rmarkdown",
      "role": "Depends"
    },
    {
      "package": "shiny",
      "role": "Depends"
    },
    {
      "package": "shinyBS",
      "role": "Depends"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    }
  ],
  "_owner": "wiesenfa",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 1,
  "_contributors": [
    {
      "user": "wiesenfa",
      "count": 17,
      "uuid": 22031404
    }
  ],
  "_userbio": {
    "uuid": 22031404,
    "type": "user",
    "name": "Manuel Wiesenfarth"
  },
  "_downloads": {
    "count": 77,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/BDP2"
  },
  "_mentions": 1,
  "_devurl": "https://github.com/wiesenfa/bdp2",
  "_searchresults": 17,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/BDP2.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/wiesenfa/bdp2",
  "_realowner": "wiesenfa",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.3",
      "date": "2018-07-31"
    }
  ],
  "_exports": [
    "BDP2",
    "BDP2_simulate",
    "BDP2workflow",
    "crit_general",
    "pFstop",
    "pFstopEcall",
    "pFstopEstop",
    "plot.cE_vs_pEcall",
    "plot.cE_vs_pEstop",
    "plotBDP2"
  ],
  "_help": [
    {
      "page": "BDP2-package",
      "title": "Bayesian Adaptive Designs for Phase II Trials with Binary Endpoint",
      "topics": [
        "BDP2-package"
      ]
    },
    {
      "page": "BDP2",
      "title": "Operating characteristics of a single-arm trial with a binary endpoint",
      "topics": [
        "BDP2"
      ]
    },
    {
      "page": "BDP2_simulate",
      "title": "Simulated operating characteristics of a single-arm trial with a binary endpoint for different types of futility criteria",
      "topics": [
        "BDP2_simulate"
      ]
    },
    {
      "page": "BDP2workflow",
      "title": "Shiny app for workflow",
      "topics": [
        "BDP2workflow"
      ]
    },
    {
      "page": "crit_general",
      "title": "Calculates CritBoundaries for different types of futility criteria",
      "topics": [
        "crit_general"
      ]
    },
    {
      "page": "internal",
      "title": "internal functions",
      "topics": [
        "BDP2_simulateEF_PredPow",
        "BDP2_simulateF",
        "BetaBinom",
        "CondPower",
        "crit",
        "CritBoundary",
        "CritBoundary1",
        "CritBoundaryE5",
        "CritBoundaryF5",
        "CritBoundaryPost",
        "CritBoundaryRates",
        "CritBoundaryTest",
        "critEF",
        "crit_general",
        "expectedNumberFstop",
        "pFstop",
        "pFstopEcall",
        "pFstopEcall_vec",
        "pFstopEstop",
        "pFstop_vec",
        "pFstop_vec_general",
        "pinconsistent",
        "plot.cE_vs_pEcall",
        "plotbFbEVSn",
        "plotExpectedNumberVSptrue",
        "plotPEcallVScE",
        "plotPEcallVSptrue",
        "plotPEcall_p0_p1VSn",
        "plotPFstopEcallVSn",
        "plotPFstopVScF",
        "plotPFstopVSptrue",
        "plotPostProb0or1SuccessesVSn",
        "plotProb0SuccessesVSn",
        "PredPower",
        "SimEF",
        "SimOC"
      ]
    },
    {
      "page": "pFstop",
      "title": "Operating characteristics of a single-arm trial with a binary endpoint with futility stopping",
      "topics": [
        "pFstop"
      ]
    },
    {
      "page": "pFstopEcall",
      "title": "operating characteristics of a single-arm trial with a binary endpoint with futility stopping and calling efficacy at interim",
      "topics": [
        "pFstopEcall"
      ]
    },
    {
      "page": "pFstopEstop",
      "title": "Operating characteristics of a single-arm trial with a binary endpoint with stopping for futility and stopping for efficacy",
      "topics": [
        "pFstopEstop"
      ]
    },
    {
      "page": "plot.cE_vs_pEcall",
      "title": "Plot objects returned by plotBDP2()",
      "topics": [
        "plot.cE_vs_pEcall",
        "plot.cE_vs_pEstop"
      ]
    },
    {
      "page": "plotBDP2",
      "title": "Plots",
      "topics": [
        "plotBDP2"
      ]
    }
  ],
  "_readme": "https://github.com/wiesenfa/bdp2/raw/HEAD/README.md",
  "_rundeps": [
    "base64enc",
    "bslib",
    "cachem",
    "cli",
    "commonmark",
    "digest",
    "evaluate",
    "fastmap",
    "fontawesome",
    "fs",
    "glue",
    "highr",
    "htmltools",
    "httpuv",
    "jquerylib",
    "jsonlite",
    "knitr",
    "later",
    "lifecycle",
    "magrittr",
    "memoise",
    "mime",
    "otel",
    "promises",
    "R6",
    "rappdirs",
    "Rcpp",
    "rlang",
    "rmarkdown",
    "sass",
    "shiny",
    "shinyBS",
    "sourcetools",
    "tinytex",
    "withr",
    "xfun",
    "xtable",
    "yaml"
  ],
  "_vignettes": [
    {
      "source": "reproduce_results.Rmd",
      "filename": "reproduce_results.html",
      "title": "Monitoring futility and efficacy in phase II trials with Bayesian posterior distributions -- a calibration approach",
      "author": "Annette Kopp-Schneider, Manuel Wiesenfarth, Ruth Witt, Dominic Edelmann, Olaf Witt and Ulrich Abel",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Parameters",
        "Figure 1",
        "Figure 2",
        "Figure 3",
        "Figure 4",
        "Figure 5",
        "Figure 6",
        "Figure 7",
        "Figure 8",
        "Figure 9",
        "Figure 10",
        "Session info"
      ],
      "created": "2018-07-24 07:10:30",
      "modified": "2021-04-07 19:44:22",
      "commits": 2
    }
  ],
  "_score": 3.929418925714293,
  "_indexed": true,
  "_nocasepkg": "bdp2",
  "_universes": [
    "wiesenfa"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.3",
      "date": "2026-06-01T09:09:38.000Z",
      "distro": "noble",
      "commit": "f674d39ef8686ab7a7cfe7e2c969ace4e2dbdb76",
      "fileid": "011edd3176b9b706a31f692fa25e10fe76836aaaca7cc8467173a2b3d2cc5fb1",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/wiesenfa/actions/runs/26745510036"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.3",
      "date": "2026-06-01T09:09:21.000Z",
      "distro": "noble",
      "commit": "f674d39ef8686ab7a7cfe7e2c969ace4e2dbdb76",
      "fileid": "daaf57942187718655a5b03b04d12e7ae3c482341d75aafeaa5fedda4844cda8",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/wiesenfa/actions/runs/26745510036"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.3",
      "date": "2026-06-01T09:10:16.000Z",
      "commit": "f674d39ef8686ab7a7cfe7e2c969ace4e2dbdb76",
      "fileid": "489facb3078c006b8f75ea23934373b54bb7698a22ca838bff0d1099e5462e23",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/wiesenfa/actions/runs/26745510036"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.3",
      "date": "2026-06-01T09:09:41.000Z",
      "commit": "f674d39ef8686ab7a7cfe7e2c969ace4e2dbdb76",
      "fileid": "2953836e777ea1d7024233484add0b5f41a6ef3df7723fd27b1fae2386e44cd8",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/wiesenfa/actions/runs/26745510036"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.3",
      "date": "2026-06-01T09:09:38.000Z",
      "commit": "f674d39ef8686ab7a7cfe7e2c969ace4e2dbdb76",
      "fileid": "d723d04ff4f6acb512c5c80dc2b6b415ebbe75d9f4edfe0a157ba231d70c59f4",
      "status": "success",
      "buildurl": "https://github.com/r-universe/wiesenfa/actions/runs/26745510036"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.3",
      "date": "2026-06-01T09:08:44.000Z",
      "commit": "f674d39ef8686ab7a7cfe7e2c969ace4e2dbdb76",
      "fileid": "64ad3a77a14505144c71b9f7ec1b70ce89007e196b20a0996a2eb903285d71ef",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/wiesenfa/actions/runs/26745510036"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.3",
      "date": "2026-06-01T09:08:43.000Z",
      "commit": "f674d39ef8686ab7a7cfe7e2c969ace4e2dbdb76",
      "fileid": "7b6c93f6c68252b0931048c4bec923e793eff81036873040b4fbb55daa142635",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/wiesenfa/actions/runs/26745510036"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.3",
      "date": "2026-06-01T09:09:05.000Z",
      "commit": "f674d39ef8686ab7a7cfe7e2c969ace4e2dbdb76",
      "fileid": "e40943c3a762f3813b74f864c1bfef26c172530dfadd6ad7e01b2d5ca38b9741",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/wiesenfa/actions/runs/26745510036"
    }
  ]
}